Medicago sativa (alfalfa) - RNA Sequence data and annotation with CADL v.10 genome
Noble Research Institute - Alfalfa Gene Expression Project
Noble Alfalfa Project Leads: Maria J. Monteros (email: mjmonteros AT noble.org); Patrick X. Zhao (email: pzhao AT noble.org)
Restrictions on dataset usage
The provided dataset includes alfalfa (M. sativa) RNA sequence, genome annotation, and gene expression data from multiple genotypes grown at pH 7, pH 4, aluminum and drought stress, re-watering conditions, and alfalfa overexpressing or not the WXP1 transcription factor (individually and collectively, “Dataset”). The Dataset is hosted in the CADL-Gene Expression Atlas and is provided pre-publication to advance research. Bulk data files are NOT being made available at this time. We will follow open-access of the data once the relevant manuscripts are published.
By BLASTING, browsing or using any of the information within the Dataset, you agree to the following:
To respect the rights of the data producers and contributors to analyze and publish the first global analyses and certain other reserved analyses of this data set in a peer-reviewed publication, which may include:
Analyses of differentially expressed genes, co-expression gene networks or other pathways of all or a subset of alfalfa genotypes in response to any of the experimental conditions used;
Comparisons between gene expression, genetic linkage mapping and metabolomics analyses;
Single gene or whole chromosome or whole genome analyses on the expression of genes or gene families;
Comparative gene expression analysis with other organisms; or
Any other analyses that may limit the opportunity for the data producers and contributors to publish the first global analysis.
To not redistribute, release, or otherwise provide access to the data to anyone outside of your group, until the data has been published or submitted to the public data repositories.
To contact Noble Alfalfa Project Leaders Maria J. Monteros (mjmonteros AT noble.org) and Patrick X. Zhao (pzhao AT noble.org) to discuss any publication plans that utilize this data prior to submission to avoid the overlap of any planned analyses.
Prior to publication of the analyses, to accurately and completely cite the pre-publication data, including any applicable analysis as “The Alfalfa Breeder’s Toolbox and Gene Expression Atlas, Maria J. Monteros, Patrick Zhao, Xinbin Dai and Chunlin He. Annotation with CADL Genome v1.0. https://www.alfalfatoolbox.org".
The Dataset, in whole or in part, is pre-competitive and is not patentable in its present state.
CLICK TO ACKNOWLEDGE AGREEMENT WITH ABOVE STATEMENTS