MSAD_210122.t1 (mRNA; Medicago sativa )

Overview
NameMSAD_210122.t1
Unique NameMSAD_210122.t1
TypemRNA
OrganismMedicago sativa (alfalfa)
Sequence length291
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MSAD_210122MSAD_210122Medicago sativagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210122.t1MSAD_210122.t1-proteinMedicago sativapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210122.t1:cdsMSAD_210122.t1:cdsMedicago sativaCDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MSAD_210122.t1:exon:193MSAD_210122.t1:exon:193Medicago sativaexon


Synonyms
The feature 'MSAD_210122.t1' has the following synonyms
Synonym
augustus_masked-Scc4a34_26-processed-gene-4.15-mRNA-1
Sequences
The following sequences are available for this feature:

mRNA sequence

>MSAD_210122.t1 ID=MSAD_210122.t1|Name=MSAD_210122.t1|organism=Medicago sativa|type=mRNA|length=291bp
ATGAGAAGGAGCTACATCCAACCATCATCAGATCTCAAGAAAATAGAGGA
AAAAAGCACCATCAACTTGAGAGAGAAGATGAGAAACTCATCAACTTCAT
TATCATATGATCATAATGAGGTAAAGAAAGTTGAGGACTCCTTGGAAACA
AATAAGAAGCTAGAGAGGAAGACTACAGAAGACATCAATGCCAGTGCTGA
TGCCTTCATCAAGAATTTCAGGAAACAACTCGTGATTCAAAGGCTTCAAT
CCATTGAGAATTATGAGAAAATGCTTGCAAGGGGTCTCTAG
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protein sequence of MSAD_210122.t1

>MSAD_210122.t1-protein ID=MSAD_210122.t1-protein|Name=MSAD_210122.t1|organism=Medicago sativa|type=polypeptide|length=97bp
MRRSYIQPSSDLKKIEEKSTINLREKMRNSSTSLSYDHNEVKKVEDSLET
NKKLERKTTEDINASADAFIKNFRKQLVIQRLQSIENYEKMLARGL.
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mRNA from alignment at Scc4a34_26:478825..479115-

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSAD_210122.t1 ID=MSAD_210122.t1|Name=MSAD_210122.t1|organism=Medicago sativa|type=mRNA|length=291bp|location=Sequence derived from alignment at Scc4a34_26:478825..479115- (Medicago sativa)
ATGAGAAGGAGCTACATCCAACCATCATCAGATCTCAAGAAAATAGAGGA AAAAAGCACCATCAACTTGAGAGAGAAGATGAGAAACTCATCAACTTCAT TATCATATGATCATAATGAGGTAAAGAAAGTTGAGGACTCCTTGGAAACA AATAAGAAGCTAGAGAGGAAGACTACAGAAGACATCAATGCCAGTGCTGA TGCCTTCATCAAGAATTTCAGGAAACAACTCGTGATTCAAAGGCTTCAAT CCATTGAGAATTATGAGAAAATGCTTGCAAGGGGTCTCTAG
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Coding sequence (CDS) from alignment at Scc4a34_26:478825..479115-

>MSAD_210122.t1 ID=MSAD_210122.t1|Name=MSAD_210122.t1|organism=Medicago sativa|type=CDS|length=291bp|location=Sequence derived from alignment at Scc4a34_26:478825..479115- (Medicago sativa)
ATGAGAAGGAGCTACATCCAACCATCATCAGATCTCAAGAAAATAGAGGA
AAAAAGCACCATCAACTTGAGAGAGAAGATGAGAAACTCATCAACTTCAT
TATCATATGATCATAATGAGGTAAAGAAAGTTGAGGACTCCTTGGAAACA
AATAAGAAGCTAGAGAGGAAGACTACAGAAGACATCAATGCCAGTGCTGA
TGCCTTCATCAAGAATTTCAGGAAACAACTCGTGATTCAAAGGCTTCAAT
CCATTGAGAATTATGAGAAAATGCTTGCAAGGGGTCTCTAG
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Properties
Property NameValue
NoteDUF761 domain protein MAKER:225.4:0.01:Medtr2g103440
AED0.01
QI0|-1|0|1|-1|1|1|0|96
eAED0.01
CADL Non-redundant FlagY
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene Ontology Update2017-11-12
Whole Genome Assembly and Annotation of Medicago sativa2016-01-05
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scc4a34_26supercontigScc4a34_26:478825..479115 -
Gene Ontology
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane