Scc4a34_16 (supercontig; Medicago sativa )

Overview
NameScc4a34_16
Unique NameScc4a34_16
Typesupercontig
OrganismMedicago sativa (alfalfa)
Sequence length96875
Analyses
This supercontig is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Medicago sativa2016-01-05
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
MSAD_210049geneMSAD_210049:69525..71910 +
MSAD_210049.t1mRNAMSAD_210049.t1:69525..71910 +
MSAD_210049.t1:exon:0exonMSAD_210049.t1:exon:0:69525..70142 +
MSAD_210049.t1:exon:1exonMSAD_210049.t1:exon:1:70390..71069 +
MSAD_210049.t1:exon:2exonMSAD_210049.t1:exon:2:71511..71910 +
MSAD_210049.t1:cdsCDSMSAD_210049.t1:cds:69525..70142 +
MSAD_210049.t1:cdsCDSMSAD_210049.t1:cds:70390..71069 +
MSAD_210049.t1:cdsCDSMSAD_210049.t1:cds:71511..71910 +
MSAD_210052geneMSAD_210052:90805..95812 +
MSAD_210052.t1mRNAMSAD_210052.t1:90805..95812 +
MSAD_210052.t1:exon:3exonMSAD_210052.t1:exon:3:90805..91648 +
MSAD_210052.t1:exon:4exonMSAD_210052.t1:exon:4:92533..93079 +
MSAD_210052.t1:exon:5exonMSAD_210052.t1:exon:5:95809..95812 +
MSAD_210052.t1:cdsCDSMSAD_210052.t1:cds:90805..91648 +
MSAD_210052.t1:cdsCDSMSAD_210052.t1:cds:92533..93079 +
MSAD_210052.t1:cdsCDSMSAD_210052.t1:cds:95809..95812 +
MSAD_210051geneMSAD_210051:77023..83244 +
MSAD_210051.t1mRNAMSAD_210051.t1:77023..83244 +
MSAD_210051.t1:exon:6exonMSAD_210051.t1:exon:6:77023..77279 +
MSAD_210051.t1:exon:7exonMSAD_210051.t1:exon:7:78614..78627 +
MSAD_210051.t1:exon:8exonMSAD_210051.t1:exon:8:80637..80777 +
MSAD_210051.t1:exon:9exonMSAD_210051.t1:exon:9:81361..81539 +
MSAD_210051.t1:exon:10exonMSAD_210051.t1:exon:10:81835..81904 +
MSAD_210051.t1:exon:11exonMSAD_210051.t1:exon:11:82697..82773 +
MSAD_210051.t1:exon:12exonMSAD_210051.t1:exon:12:82868..83244 +
MSAD_210051.t1:cdsCDSMSAD_210051.t1:cds:80723..80777 +
MSAD_210051.t1:cdsCDSMSAD_210051.t1:cds:81361..81539 +
MSAD_210051.t1:cdsCDSMSAD_210051.t1:cds:81835..81904 +
MSAD_210051.t1:cdsCDSMSAD_210051.t1:cds:82697..82773 +
MSAD_210051.t1:cdsCDSMSAD_210051.t1:cds:82868..82930 +
MSAD_210043geneMSAD_210043:27394..31435 -
MSAD_210043.t1mRNAMSAD_210043.t1:27394..31435 -
MSAD_210043.t1:exon:20exonMSAD_210043.t1:exon:20:27394..27574 -
MSAD_210043.t1:exon:19exonMSAD_210043.t1:exon:19:29494..29842 -
MSAD_210043.t1:exon:18exonMSAD_210043.t1:exon:18:29925..30074 -
MSAD_210043.t1:exon:17exonMSAD_210043.t1:exon:17:30170..30626 -
MSAD_210043.t1:exon:16exonMSAD_210043.t1:exon:16:30987..31435 -
MSAD_210043.t1:cdsCDSMSAD_210043.t1:cds:30987..31435 -
MSAD_210043.t1:cdsCDSMSAD_210043.t1:cds:30170..30626 -
MSAD_210043.t1:cdsCDSMSAD_210043.t1:cds:29925..30074 -
MSAD_210043.t1:cdsCDSMSAD_210043.t1:cds:29510..29842 -
MSAD_210050geneMSAD_210050:74764..77331 -
MSAD_210050.t1mRNAMSAD_210050.t1:74764..77331 -
MSAD_210050.t1:exon:24exonMSAD_210050.t1:exon:24:76865..77331 -
MSAD_210050.t1:exon:23exonMSAD_210050.t1:exon:23:75429..75870 -
MSAD_210050.t1:exon:22exonMSAD_210050.t1:exon:22:75182..75331 -
MSAD_210050.t1:exon:21exonMSAD_210050.t1:exon:21:74764..75099 -
MSAD_210050.t1:cdsCDSMSAD_210050.t1:cds:76865..77331 -
MSAD_210050.t1:cdsCDSMSAD_210050.t1:cds:75429..75870 -
MSAD_210050.t1:cdsCDSMSAD_210050.t1:cds:75182..75331 -
MSAD_210050.t1:cdsCDSMSAD_210050.t1:cds:74764..75099 -
MSAD_210047geneMSAD_210047:43535..44645 -
MSAD_210047.t1mRNAMSAD_210047.t1:43535..44645 -
MSAD_210047.t1:exon:27exonMSAD_210047.t1:exon:27:44199..44645 -
MSAD_210047.t1:exon:26exonMSAD_210047.t1:exon:26:43952..44101 -
MSAD_210047.t1:exon:25exonMSAD_210047.t1:exon:25:43535..43870 -
MSAD_210047.t1:cdsCDSMSAD_210047.t1:cds:44199..44645 -
MSAD_210047.t1:cdsCDSMSAD_210047.t1:cds:43952..44101 -
MSAD_210047.t1:cdsCDSMSAD_210047.t1:cds:43535..43870 -
MSAD_210042geneMSAD_210042:11587..21017 -
MSAD_210042.t1mRNAMSAD_210042.t1:11587..21017 -
MSAD_210042.t1:exon:42exonMSAD_210042.t1:exon:42:20957..21017 -
MSAD_210042.t1:exon:41exonMSAD_210042.t1:exon:41:20721..20853 -
MSAD_210042.t1:exon:40exonMSAD_210042.t1:exon:40:17905..17932 -
MSAD_210042.t1:exon:39exonMSAD_210042.t1:exon:39:17559..17604 -
MSAD_210042.t1:exon:38exonMSAD_210042.t1:exon:38:15812..15951 -
MSAD_210042.t1:exon:37exonMSAD_210042.t1:exon:37:15438..15638 -
MSAD_210042.t1:exon:36exonMSAD_210042.t1:exon:36:14801..14866 -
MSAD_210042.t1:exon:35exonMSAD_210042.t1:exon:35:14101..14308 -
MSAD_210042.t1:exon:34exonMSAD_210042.t1:exon:34:13928..13995 -
MSAD_210042.t1:exon:33exonMSAD_210042.t1:exon:33:12760..13815 -
MSAD_210042.t1:exon:32exonMSAD_210042.t1:exon:32:12618..12671 -
MSAD_210042.t1:exon:31exonMSAD_210042.t1:exon:31:12458..12486 -
MSAD_210042.t1:exon:30exonMSAD_210042.t1:exon:30:12103..12177 -
MSAD_210042.t1:exon:29exonMSAD_210042.t1:exon:29:11922..12009 -
MSAD_210042.t1:exon:28exonMSAD_210042.t1:exon:28:11587..11673 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:20957..21017 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:20721..20853 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:17905..17932 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:17559..17604 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:15812..15951 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:15438..15638 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:14801..14866 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:14101..14308 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:13928..13995 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:12760..13815 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:12618..12671 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:12458..12486 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:12103..12177 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:11922..12009 -
MSAD_210042.t1:cdsCDSMSAD_210042.t1:cds:11587..11673 -
MSAD_210045geneMSAD_210045:37009..38182 -
MSAD_210045.t1mRNAMSAD_210045.t1:37009..38182 -
MSAD_210045.t1:exon:47exonMSAD_210045.t1:exon:47:37009..37110 -
MSAD_210045.t1:exon:46exonMSAD_210045.t1:exon:46:37118..37174 -
MSAD_210045.t1:exon:45exonMSAD_210045.t1:exon:45:37277..37357 -
MSAD_210045.t1:exon:44exonMSAD_210045.t1:exon:44:37476..37515 -
MSAD_210045.t1:exon:43exonMSAD_210045.t1:exon:43:37715..38182 -
MSAD_210045.t1:cdsCDSMSAD_210045.t1:cds:37715..37746 -
MSAD_210045.t1:cdsCDSMSAD_210045.t1:cds:37476..37515 -
MSAD_210045.t1:cdsCDSMSAD_210045.t1:cds:37277..37357 -
MSAD_210045.t1:cdsCDSMSAD_210045.t1:cds:37118..37174 -
MSAD_210045.t1:cdsCDSMSAD_210045.t1:cds:37009..37110 -
MSAD_210044geneMSAD_210044:34560..36887 -
MSAD_210044.t1mRNAMSAD_210044.t1:34560..36887 -
MSAD_210044.t1:exon:51exonMSAD_210044.t1:exon:51:34560..34996 -
MSAD_210044.t1:exon:50exonMSAD_210044.t1:exon:50:35397..35421 -
MSAD_210044.t1:exon:49exonMSAD_210044.t1:exon:49:35687..35774 -
MSAD_210044.t1:exon:48exonMSAD_210044.t1:exon:48:36859..36887 -
MSAD_210044.t1:cdsCDSMSAD_210044.t1:cds:36859..36887 -
MSAD_210044.t1:cdsCDSMSAD_210044.t1:cds:35687..35774 -
MSAD_210044.t1:cdsCDSMSAD_210044.t1:cds:35397..35421 -
MSAD_210044.t1:cdsCDSMSAD_210044.t1:cds:34899..34996 -
MSAD_210048geneMSAD_210048:66849..67284 -
MSAD_210048.t1mRNAMSAD_210048.t1:66849..67284 -
MSAD_210048.t1:exon:53exonMSAD_210048.t1:exon:53:67161..67284 -
MSAD_210048.t1:exon:52exonMSAD_210048.t1:exon:52:66849..67051 -
MSAD_210048.t1:cdsCDSMSAD_210048.t1:cds:67161..67284 -
MSAD_210048.t1:cdsCDSMSAD_210048.t1:cds:66849..67051 -